BioKotlin/biokotlin.data

Package-level declarations

Types

typealias CodonSet = ImmutableSet<Codon>

data class CodonTable(val id: Int, val name: List<String>, val start_codons: List<Codon>, val stop_codons: List<Codon>, val codonToAA: Map<Codon, AminoAcid>, val ambiguous: Boolean = false)

The genetic code or codon table for a clade of life

Return the complete list of DNA and RNA CodonTable

Standard DNA and RNA Codon table (Table 1 or "SGC0")

fun CodonTable(id: Int = 1, ambiguous: Boolean = false): CodonTable

Return the DNA and RNA CodonTable based on NCBI id

fun CodonTable(name: String, ambiguous: Boolean = false): CodonTable

Return the DNA and RNA CodonTable based on name