NucSeq

fun NucSeq(vararg seq: String, convertStates: Boolean = true): NucSeq

Preferred method for creating a DNA or RNA sequence.

It will infer DNA from RNA based on whether there are T or U in the sequence (DNA is default if neither). Multiple string will be concatenated.

val dnaSeq = NucSeq("GCATA")
val rnaSeq = Seq("GCAUA")
println( dnaSeq == NucSeq("GCA", "TA"))

fun NucSeq(seq: String, preferredNucSet: NucSet, convertStates: Boolean = true): NucSeq

Create a NucSeq with a specified NucSet

preferredNucSet