Data structures¶
Working notes
This page collects design notes that predate much of the current implementation. For the types that exist today, see the API reference.
Basic data flow¶
Concepts¶
Funcalog - see Terms.
Gene - focused on protein-producing genome sequences, but non-coding RNA (tRNA, rRNA, miRNA) can all be captured by the model.
Further levels in the model:
- Genome
- MolecularContext
- RNALevel
- ProteinLevel
- ProteinKinetics