SeqRecord

A SeqRecord consists of a Seq and several optional annotations.

Main attributes:

• id - Identifier such as a locus tag (string)

• seq - The sequence itself (Seq) Additional attributes:

• name - Sequence name, e.g. gene name (string)

• description - Additional text (string)

• annotations - A map of strings containing key-value pairs of annotations for different features

• letterAnnotations - Per letter/symbol annotation. This holds an ImmutableList whose length matches that of the sequence. A typical use would be to hold a list of integers representing sequencing quality scores.

Inheritors